Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954391.1_cds_XP_016493271.1_83398
CDS Infomation

[gene=LOC107812640] [db_xref=GeneID:107812640] [protein=serine/threonine-protein kinase EDR1-like] [protein_id=XP_016493271.1] [location=join(8761..8883,9039..9612,9839..9879,9983..10051,10130..10230,10373..10451,10565..10663,10751..10819,10924..10973,11724..11805,12425..12519,12612..12714)] [gbkey=CDS]
Sequence

ATGTTATCAACATTTCAGGCTGCACGGCTGAATTTCAGTTTGCTAGGTAGGAAGATTAGA
GCTAATTCAGAAAGCTCAGAGACGGATGAGTCTAAATTTGATATTGCTCAGCCTTCTAAA
CTAGTGGCAAAGGTTATGTCAAAGCTTCAAATTACAGGATTTGGAAATACTAGGGAAGAA
ATGTGTGGAAATATTCAACCGAATGGACGCGATAAAACTTCTATTAGTGAGGATGTCACG
GGACCTTATTTGCCATCAGCTTCAGAGGGAAAGTATAGTCATGTTCTTGATGCCTATCAT
GATTTCCAGAATATACTGAAGACATCTTGTTTTACTCGAAGAACGTTTGCACCTGAAAAT
GCACAAATAGCGCCCACTGATGTTGCAGAGGGTCCAATAGCTAACTGCTCCAGAAAGTTT
GATGAATGTTCTAAGGCATTCAGATCTCCTGAACAGTTGCCAAGATCATGTTTCGAAAAC
AACGATAAATATCTCAAGTCACAGATGGGAAATTCAAAACTTTCAGCGATGGAAGATTCT
TCTCGACAACAGTTAGAAAATCAACAGTCACGGAAGTCAGGGGAGAGCACTAGAAGCAGC
CAGGGAAATTCACAGAAATATGAGAACGGGATAAGCTTGACAGCACATTGTGAAATATCT
TGGGAAGACATCAGCCTAAGGGAAGAAATTGGACGAGGTGCATATGCCCTTGTGTATCAT
GGAATCTGGAAAGGATCGGATGTTGCTGTAAAGGTTTATTTTGGGAACCAATGTGGTGAG
ACAACTTTGCTTGACTACAAAAAGGAGATTGACATAATGAAAAGACTTAGACATCCAAGC
GTGCTATTATTTATGGGAGCAGTATGTTCCCAAGAAAAGCTTGCCATTGTCACAGAGTAT
TTACCCAGGGGAAGTCTTTTTAAAGCACTTCACAGGAATAATCAGCCGCTAGACCTCAAA
AGGCGTCTTAGAATGGCTCTTGACGTGGCTAGGGGTATGAATTACTTGCACCGACGAAAC
CCTCCAATAGTACATAGAGACCTGAAATCTTCAAACCTGCTTGTGGATAAAAGCTGGACT
GTCAAGGTTGCAGATTTTGGCCTTTCAAAACTGAAACATGCTACCTTTTTAACAGCAAAT
TCTGGACGAGGGACGCCTCAGTGGATGGCTCCTGAAGTACTTAGAAATGAACCTTCAACA
GAGAAATCTGATGTCTTTAGTTTCGGTGTGATCTTATGGGAGCTAATGACTGAATCGATT
CCGTGGAAAAACCTTAATCCCTTACAGGTTGTTGGAATTGTTGGCTTCATGGATAGCAGA
CTGGACATTCCACAAAATCTTGATTCCCGAGTTTCAGCTATTATACATGATTGTTGGCAA
AGCAAACCAGAACTTCGTCCATCATTTGAAGACCTGAGCAGAAGAATGACAGAAATAATT
CTCTCATTTGGAGGACTGACATCTAGGAAGAACTCAGGGCTTTGA

Peptide Sequence

PEP ID

XP_016493271.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase EDR1-like [Nicotiana tabacum]
Sequence

MLSTFQAARLNFSLLGRKIRANSESSETDESKFDIAQPSKLVAKVMSKLQITGFGNTREE
MCGNIQPNGRDKTSISEDVTGPYLPSASEGKYSHVLDAYHDFQNILKTSCFTRRTFAPEN
AQIAPTDVAEGPIANCSRKFDECSKAFRSPEQLPRSCFENNDKYLKSQMGNSKLSAMEDS
SRQQLENQQSRKSGESTRSSQGNSQKYENGISLTAHCEISWEDISLREEIGRGAYALVYH
GIWKGSDVAVKVYFGNQCGETTLLDYKKEIDIMKRLRHPSVLLFMGAVCSQEKLAIVTEY
LPRGSLFKALHRNNQPLDLKRRLRMALDVARGMNYLHRRNPPIVHRDLKSSNLLVDKSWT
VKVADFGLSKLKHATFLTANSGRGTPQWMAPEVLRNEPSTEKSDVFSFGVILWELMTESI
PWKNLNPLQVVGIVGFMDSRLDIPQNLDSRVSAIIHDCWQSKPELRPSFEDLSRRMTEII
LSFGGLTSRKNSGL

Transcript Sequence

Gene sequence data has not been registered.